Joost Batenburg
- Full Name
- Prof.dr. K.J. Batenburg
- Function(s)
- Professor - Universiteit Leiden, Group leader, Scientific Staff Member
- K.J.Batenburg@cwi.nl
- Telephone
- +31 20 592 4037
- Room
- L020
- Department(s)
- Computational Imaging
Biography
Joost Batenburg published more than 80 journal articles and more than 60 conference papers in the field of tomographic image processing and reconstruction. From 2013 till 2017 he chaired the EU COST Action EXTREMA on advanced X-ray tomography. He pioneered the field of discrete tomography, developing the first large-scale reconstruction methods. His current research focuses on creating a real-time tomography pipeline, funded by an NWO Vici grant. He is responsible for the FleX-Ray lab, where a custom-designed CT system is linked to advanced data processing and reconstruction algorithms.
Publications
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De Carlo, F, Gürsoy, D, Ching, D.J, Batenburg, K.J, Ludwig, W, Mancini, L, … Rivers, M. (2018). TomoBank: A tomographic data repository for computational x-ray science. Measurement Science and Technology, 29(3). doi:10.1088/1361-6501/aa9c19
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van Leeuwen, T, Maretzke, S.C, & Batenburg, K.J. (2018). Automatic alignment for three-dimensional tomographic reconstruction. Inverse Problems, 34(2). doi:10.1088/1361-6420/aaa0f8
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Zhong, Z, Aveyard, R, Rieger, B, Bals, S, Palenstijn, W.J, & Batenburg, K.J. (2018). Automatic correction of nonlinear damping effects in HAADF–STEM tomography for nanomaterials of discrete compositions. Ultramicroscopy, 184, 57–65. doi:10.1016/j.ultramic.2017.10.013
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Kazantsev, D, Bleichrodt, F, van Leeuwen, T, Withers, P.J, Batenburg, K.J, & Lee, P.D. (2017). A novel tomographic reconstruction method based on the robust Student's t function for suppressing data outliers. IEEE Transactions on Computational Imaging, 3(4), 682–693. doi:10.1109/TCI.2017.2694607
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Kus, M, Altantzis, T, Vercauteren, S, Caretti, I, Leenaerts, O, Batenburg, K.J, … Cool, P. (2017). Mechanistic insight into the photocatalytic working of fluorinated anatase {001} nanosheets. Journal of Physical Chemistry C, 121(47), 26275–26286. doi:10.1021/acs.jpcc.7b05586
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Sentosun, K, Lobato, I, Bladt, E, Zhang, Y, Palenstijn, W.J, Batenburg, K.J, … Bals, S. (2017). Artifact reduction based on sinogram interpolation for the 3D reconstruction of nanoparticles using electron tomography. Particle & Particle Systems Characterization, 34(12). doi:10.1002/ppsc.201700287
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Kadu, A, van Leeuwen, T, & Batenburg, K.J. (2017). A parametric level-set method for partially discrete tomography. In Lecture Notes in Computer Science/Lecture Notes in Artificial Intelligence (pp. 122–134). doi:10.1007/978-3-319-66272-5_11
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Ringh, A, Zhuge, X, Palenstijn, W.J, Batenburg, K.J, & Öktem, O. (2017). High-level algorithm prototyping: An example extending the TVR-DART algorithm. In Lecture Notes in Computer Science/Lecture Notes in Artificial Intelligence (pp. 109–121). doi:10.1007/978-3-319-66272-5_10
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Jinnai, H, Higuchi, T, Zhuge, X, Kumamoto, A, Batenburg, K.J, & Ikuhara, Y. (2017). Three-dimensional visualization and characterization of polymeric self-assemblies by Transmission Electron Microtomography. Accounts of Chemical Research, 50(6), 1293–1302. doi:10.1021/acs.accounts.7b00103
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Aveyard, R, Zhong, Z, Batenburg, K.J, & Rieger, B. (2017). Optimizing experimental parameters for the projection requirement in HAADF-STEM tomography. Ultramicroscopy, 177, 84–90. doi:10.1016/j.ultramic.2017.03.009
Current projects with external funding
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Mathematics and Algorithms for 3D Imaging of Dynamic Processes
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Non-destructive 3D spectral imaging: applications in the poultry industry
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Real-Time 3D Tomography
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The See-Through Museum
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Automated multi-modal tomography for sub-22nm IC nodes (AMTIC)
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MUltiscale, Multimodal and Multidimensional imaging for EngineeRING (MUMMERING)
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Volumetric medical x-ray imaging at extremely low dose (VOXEL)
Professional activities
- Professor: Universiteit Leiden
- Chair: International Association for Pattern Recognition - [IAPR] - Technical Committee on Discrete Geometry
- Chair: EU COST Action EXTREMA
- Editor: Associate Editor of Image Processing Online (IPOL)
- Editor: Associate Editor of Journal of Mathematical Imaging and Vision (Springer)
- Editor: Associate Editor of IEEE Transactions on Computational Imaging
Grants
- Vici Innovational Research Grant NWO - Real-Time 3D Tomography (2016)
- Vidi Innovational Research Grant NWO (2010)
- FWO Postdoctoral Fellowship (2007)
- FWO Visiting Postdoctoral Fellowship (2006)
Awards
- C.J. Kok Prize - January (2007)
- Philips Mathematics Prize - March (2006)