Joost Batenburg
- Full Name
- Prof.dr. K.J. Batenburg
- Function(s)
- Professor - Universiteit Leiden, Group leader, Scientific Staff Member
- K.J.Batenburg@cwi.nl
- Telephone
- +31 20 592 4037
- Room
- L020
- Department(s)
- Computational Imaging
Biography
Joost Batenburg published more than 80 journal articles and more than 60 conference papers in the field of tomographic image processing and reconstruction. From 2013 till 2017 he chaired the EU COST Action EXTREMA on advanced X-ray tomography. He pioneered the field of discrete tomography, developing the first large-scale reconstruction methods. His current research focuses on creating a real-time tomography pipeline, funded by an NWO Vici grant. He is responsible for the FleX-Ray lab, where a custom-designed CT system is linked to advanced data processing and reconstruction algorithms.
Publications
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Kostenko, A, Palenstijn, W.J, Coban, S.B, Hendriksen, A.A, van Liere, R, & Batenburg, K.J. (2020). Prototyping X-ray tomographic reconstruction pipelines with FleXbox. SoftwareX, 11. doi:10.1016/j.softx.2019.100364
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Buurlage, J, Marone, F, Pelt, D.M, Palenstijn, W.J, Stampanoni, M, Batenburg, K.J, & Schlepütz, C.M. (2019). Real-time reconstruction and visualisation towards dynamic feedback control during time-resolved tomography experiments at TOMCAT. Nature Scientific Reports, 9(1). doi:10.1038/s41598-019-54647-4
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Der Sarkissian, H.H, Lucka, F, van Eijnatten, M.A.J.M, Colacicco, G, Coban, S.B, & Batenburg, K.J. (2019). A cone-beam X-ray computed tomography data collection designed for machine learning. Scientific Data, 6(1). doi:10.1038/s41597-019-0235-y
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Bender, H, Richard, O, Kundu, P, Favia, P, Zhong, Z, Palenstijn, W.J, … Schoenmakers, R. (2019). Combined STEM-EDS tomography of nanowire structures. Semiconductor Science and Technology, 34(11). doi:10.1088/1361-6641/ab4840
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Minnema, J, van Eijnatten, M.A.J.M, Hendriksen, A.A, Liberton, N.P.T.J, Pelt, D.M, Batenburg, K.J, … Wolff, J. (2019). Segmentation of dental cone-beam CT scans affected by metal artifacts using a mixed-scale dense convolutional neural network. Medical Physics. doi:10.1002/mp.13793
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Hendriksen, A.A, Pelt, D.M, Palenstijn, W.J, Coban, S.B, & Batenburg, K.J. (2019). On-the-fly machine learning for improving image resolution in tomography. Applied Sciences, 9(12). doi:10.3390/app9122445
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Viganò, N.R, Martínez Gil, P.M, Herzog, C, de la Rochefoucauld, O, Liere, R.V. (Robert Van), & Batenburg, K.J. (2019). Advanced light-field refocusing through tomographic modeling of the photographed scene. Optics Express, 27(6), 7834–7856. doi:10.1364/OE.27.007834
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Buurlage, J, Bisseling, R.H, & Batenburg, K.J. (2019). A geometric partitioning method for distributed tomographic reconstruction. Parallel Computing, 81, 104–121. doi:10.1016/j.parco.2018.12.007
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Zeegers, M.T, Lucka, F, & Batenburg, K.J. (2018). A Multi-Channel DART algorithm. In Proceedings of IWCIA 2018 (pp. 164–178). doi:10.1007/978-3-030-05288-1_13
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Zhong, Z, Palenstijn, W.J, Viganò, N.R, & Batenburg, K.J. (2018). Numerical methods for low-dose EDS tomography. Ultramicroscopy, 194, 133–142. doi:10.1016/j.ultramic.2018.08.003
Current projects with external funding
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Mathematics and Algorithms for 3D Imaging of Dynamic Processes ()
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Non-destructive 3D spectral imaging: applications in the poultry industry ()
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Real-Time 3D Tomography ()
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PPS contract Planmeca
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CT for Art: from Images to Patterns (IMPACT4Art)
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MUltiscale, Multimodal and Multidimensional imaging for EngineeRING (MUMMERING)
Professional activities
- Professor: Universiteit Leiden
- Chair: International Association for Pattern Recognition - [IAPR] - Technical Committee on Discrete Geometry
- Chair: EU COST Action EXTREMA
- Editor: Associate Editor of Image Processing Online (IPOL)
- Editor: Associate Editor of Journal of Mathematical Imaging and Vision (Springer)
- Editor: Associate Editor of IEEE Transactions on Computational Imaging
Grants
- Vici Innovational Research Grant NWO - Real-Time 3D Tomography (2016)
- Vidi Innovational Research Grant NWO (2010)
- FWO Postdoctoral Fellowship (2007)
- FWO Visiting Postdoctoral Fellowship (2006)
Awards
- C.J. Kok Prize - January (2007)
- Philips Mathematics Prize - March (2006)